I have the exact same problem. It seems not te be a codec issue, for every movie plays well in Media player, VLC, and even in video editing software I have.
I tried to uninstall and reinstall several matroska splitters, disabled and enabled the built-in codecs from BS player and so on... The problem persists.
I am glad to have found out that the problem is not occuring in 2.56.
I will be downgrading immediately!
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