I don't really know... I looked at the base skin code and it seems that all it's ok, maybe a skin engine bug, or caodec compatibility issue or...a your system problem I-don't-know-how fixed with the new version :roll:
Have you tried to build .BSZ skin from Base one and seen if the problem persisted?
If you don't know how to make a .bsz skin you can use my program BSP SkinMaker (link in my sign)..
Still a reeeeeally strange bug for me :P
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